Welcome to our rOpenSci Interns

April 27, 2017

By:   Scott Chamberlain  |   Stefanie Butland

There’s a lot of work that goes in to making software: the code that does the thing itself, unit testing, examples, tutorials, documentation, and support. rOpenSci software is created and maintained both by our staff and by our (awesome) community. In keeping with our aim to build capacity of software users and developers, three interns from our academic home at UC Berkeley are now working with us as well. Our interns are mentored by Carl Boettiger, Scott Chamberlain, and Karthik Ram and they will receive academic credit and/or pay for their work.

Release 'open' data from their PDF prisons using tabulizer

April 18, 2017

By:   Thomas J. Leeper

There is no problem in science quite as frustrating as other peoples’ data. Whether it’s malformed spreadsheets, disorganized documents, proprietary file formats, data without metadata, or any other data scenario created by someone else, scientists have taken to Twitter to complain about it. As a political scientist who regularly encounters so-called “open data” in PDFs, this problem is particularly irritating. PDFs may have “portable” in their name, making them display consistently on various platforms, but that portability means any information contained in a PDF is irritatingly difficult to extract computationally.

Data validation with the assertr package

April 11, 2017

By:   Tony Fischetti

This is cross-posted from Tony's blog onthelambda.com *Version 2.0 of my data set validation package assertr hit CRAN just this weekend. It has some pretty great improvements over version 1. For those new to the package, what follows is a short and new introduction. For those who are already using assertr, the text below will point out the improvements.* I can (and have) go on and on about the treachery of messy/bad datasets.

Everybody talks about the weather

April 4, 2017

By:   Adam Sparks

Everybody talks about the weather, but nobody does anything about it. - Charles Dudley Warner As a scientist who models plant diseases, I use a lot of weather data. Often this data is not available for areas of interest. Previously, I worked with the International Rice Research Institute (IRRI) and often the countries I was working with did not have weather data available or I was working on a large area covering several countries and needed a single source of data to work from.

camsRad, satellite-based time series of solar irradiation

March 21, 2017

By:   Lukas Lundström

camsRad is a lightweight R client for the CAMS Radiation Service, that provides satellite-based time series of solar irradiation for the actual weather conditions as well as for clear-sky conditions. Satellite-based solar irradiation data have been around roughly as long our modern era satellites. But the price tag has been very high, in the range of several thousand euros per site. This has damped research and development of downstream applications. With CAMS Radiation Service coming online in 2016, this changed as the services are provided under the (not yet fully implemented) European Union stand point that data and services produced with public funding shall be provided on free and open grounds.

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